BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F12LP1|AL425575
(386 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1602 358 5e-99
>3x_Contig1602
Length = 12694
Score = 358 bits (171), Expect = 5e-99
Identities = 286/343 (83%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 1 atgaaataggtaaagtaagatgagmgagaaagtatgggagagaatgggaggagtgagaga 60
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 1716 atgaaataggtaaagtaagatgagcgagacagtatgggagagaatgggaggagtgagaga 1775
Query: 61 ratatatataaagtgatttatttattttttttgtatatmttmamttttggtgtmtgtamt 120
|||||||| | ||||||| |||||||||||||| | | || ||||||||| ||| |
Sbjct: 1776 aatatatatcacgtgatttctttattttttttgtctctcttcccttttggtgtctgtcct 1835
Query: 121 mttttagtttgtmmmttatgtmagmaagtataatttttamtmtmgtttttagaggmamaa 180
||||||||||| |||||| || |||| || ||||| | | |||||| |||| ||
Sbjct: 1836 cttttagtttgtcccttatgtcagcaagtctactttttcctctcgtttttcgaggcccaa 1895
Query: 181 aaatamatttgaaamaaggaagmtagmatatgmtmattamtaamtatagmattttttttt 240
|||| |||||| ||||||| ||| ||||| | ||| ||| ||||| | ||||||||
Sbjct: 1896 aaatccatttgacccaaggaagctagcatatgctcattcctaactatagca-tttttttt 1954
Query: 241 tttttttgattttattaamttaaaattatatawaggktgaaattagaatttgaaatgatt 300
||||||||||||| || ||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 1955 tttttttgattttcttcccttaaaattatatataggttgaaattagaatttgaaatgatt 2014
Query: 301 tattataaaataaaatgaggaatgatgtaaaagaaaaatggaa 343
|||| ||| || | |||||||||||||||| ||||| ||||||
Sbjct: 2015 tattctaacatcacatgaggaatgatgtaacagaaacatggaa 2057
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.722 1.37
Gapped
Lambda K H
1.45 0.722 1.37
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,133
Number of Sequences: 1807
Number of extensions: 14133
Number of successful extensions: 5244
Number of sequences better than 1.0e-20: 1
length of query: 386
length of database: 10,358,551
effective HSP length: 15
effective length of query: 371
effective length of database: 10,331,446
effective search space: 3832966466
effective search space used: 3832966466
T: 0
A: 40
X1: 5 (10.5 bits)
X2: 14 (29.3 bits)
S1: 11 (23.5 bits)
S2: 47 (98.9 bits)